ANA Wings is a regional Japanese airline and a wholly owned subsidiary of All Nippon Airways (ANA).

Amakusa Airlines is an airline based in Amakusa, Kumamoto Prefecture, Japan.

J-Air is a regional commuter airline with its and its main hub at Nagoya Airfield.

Jetstar Japan is a low-fare Japanese airline based in Tokyo.

Peach Aviation operating under the brand name Peach is a low-cost airline based in Japan.

Spring Airlines Japan is a low-cost airline headquartered in Kozunomori, Narita, Japan.

Air Do is a regional airline operating scheduled service between the islands of Honshu and Hokkaid? in cooperation with ANA.

Fuji Dream Airlines is a domestic airline headquartered in Makinohara, Shizuoka, Japan, with its main hub at Shizuoka Airport.

Japan Air Commuter is a Japanese airline based in Kirishima, Kagoshima Prefecture and is a feeder airline to Japan Airlines.

New Central Airservice operates domestic services and its main base is Chofu Airport, Tokyo.

Ryukyu Air Commuter is an airline headquartered in Naha, Okinawa Prefecture, Japan operating domestic passenger services.

StarFlyer is a Japanese airline headquartered on the grounds of Kitakyushu Airport in Fukuoka.

airtransset operates scheduled passenger services. Its main base is Hakodate Airport in Hakodate.

Hokkaido Air System operates scheduled domestic services in Hokkaido with Its main base of operations at Okadama Airport.

Japan Airlines is the flag carrier airline of Japan and is headquartered in Shinagawa, Tokyo.

New Japan Aviation operates scheduled air service between Niigata and Sado Island.

Skymark Airlines is a low-cost airline operating scheduled passenger services within Japan.

Vanilla Air is a low-cost airline in Japan wholly owned by All Nippon Airways.

All Nippon Airways (ANA) is the largest airline in Japan and operates services to both domestic and international destinations.

Ibex Airlines is an airline headquartered in Koro, Tokyo, Japan operating domestic services.

Japan Transocean Air (JTA) is an airline based in Naha, Okinawa Prefecture, Japan operating domestic services.

Oriental Air Bridge operates charter services as well as scheduled services between Nagasaki and Fukuoka.

Solaseed Air is a low-cost airline headquartered on the property of Miyazaki Airport in Miyazaki, Miyazaki Prefecture, Japan.